PoplarV1, Main, Exploration, bibRecord, 000973

Evolutionary Insight into the Clock-Associated PRR5 Transcriptional Network of Flowering Plants.

Identifieur interne : 000973 ( Main/Exploration ); précédent : 000972; suivant : 000974

Evolutionary Insight into the Clock-Associated PRR5 Transcriptional Network of Flowering Plants.

Auteurs : Yosuke Toda [Japon] ; Toru Kudo [Japon] ; Toshinori Kinoshita [Japon] ; Norihito Nakamichi [Japon]

Source :

Scientific reports [ 2045-2322 ] ; 2019.

RBID : pubmed:30814643

Descripteurs français

English descriptors

KwdEn :
- Arabidopsis (genetics), Arabidopsis Proteins (genetics), Arabidopsis Proteins (metabolism), Circadian Clocks (genetics), Circadian Rhythm (genetics), Gene Expression Regulation, Plant (genetics), Gene Regulatory Networks (genetics), Magnoliopsida (genetics), Oryza (genetics), Populus (genetics), Promoter Regions, Genetic (genetics), Repressor Proteins (genetics), Transcription Factors (genetics), Transcription Factors (metabolism).
MESH :
- chemical , genetics : Arabidopsis Proteins, Repressor Proteins, Transcription Factors.
- genetics : Arabidopsis, Circadian Clocks, Circadian Rhythm, Gene Expression Regulation, Plant, Gene Regulatory Networks, Magnoliopsida, Oryza, Populus, Promoter Regions, Genetic.
- chemical , metabolism : Arabidopsis Proteins, Transcription Factors.

Abstract

Circadian clocks regulate the daily timing of metabolic, physiological, and behavioral activities to adapt organisms to day-night cycles. In the model plant Arabidopsis thaliana, transcript-translational feedback loops (TTFL) constitute the circadian clock, which is conserved among flowering plants. Arabidopsis TTFL directly regulates key genes in the clock-output pathways, whereas the pathways for clock-output control in other plants is largely unknown. Here, we propose that the transcriptional networks of clock-associated pseudo-response regulators (PRRs) are conserved among flowering plants. Most PRR genes from Arabidopsis, poplar, and rice encode potential transcriptional repressors. The PRR5-target-like gene group includes genes that encode key transcription factors for flowering time regulation, cell elongation, and chloroplast gene expression. The 5'-upstream regions of PRR5-target-like genes from poplar and rice tend to contain G-box-like elements that are potentially recognized by PRRs in vivo as has been shown in Arabidopsis. Expression of PRR5-target-like genes from poplar and rice tends to decrease when PRRs are expressed, possibly suggesting that the transcriptional network of PRRs is evolutionarily conserved in these plants.

DOI: 10.1038/s41598-019-39720-2
PubMed: 30814643
PubMed Central: PMC6393427

Affiliations:

Japon

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000A11
to stream Main, to step Curation: 000A11

Le document en format XML

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<front><div type="abstract" xml:lang="en">Circadian clocks regulate the daily timing of metabolic, physiological, and behavioral activities to adapt organisms to day-night cycles. In the model plant Arabidopsis thaliana, transcript-translational feedback loops (TTFL) constitute the circadian clock, which is conserved among flowering plants. Arabidopsis TTFL directly regulates key genes in the clock-output pathways, whereas the pathways for clock-output control in other plants is largely unknown. Here, we propose that the transcriptional networks of clock-associated pseudo-response regulators (PRRs) are conserved among flowering plants. Most PRR genes from Arabidopsis, poplar, and rice encode potential transcriptional repressors. The PRR5-target-like gene group includes genes that encode key transcription factors for flowering time regulation, cell elongation, and chloroplast gene expression. The 5'-upstream regions of PRR5-target-like genes from poplar and rice tend to contain G-box-like elements that are potentially recognized by PRRs in vivo as has been shown in Arabidopsis. Expression of PRR5-target-like genes from poplar and rice tends to decrease when PRRs are expressed, possibly suggesting that the transcriptional network of PRRs is evolutionarily conserved in these plants.</div>
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<Abstract><AbstractText>Circadian clocks regulate the daily timing of metabolic, physiological, and behavioral activities to adapt organisms to day-night cycles. In the model plant Arabidopsis thaliana, transcript-translational feedback loops (TTFL) constitute the circadian clock, which is conserved among flowering plants. Arabidopsis TTFL directly regulates key genes in the clock-output pathways, whereas the pathways for clock-output control in other plants is largely unknown. Here, we propose that the transcriptional networks of clock-associated pseudo-response regulators (PRRs) are conserved among flowering plants. Most PRR genes from Arabidopsis, poplar, and rice encode potential transcriptional repressors. The PRR5-target-like gene group includes genes that encode key transcription factors for flowering time regulation, cell elongation, and chloroplast gene expression. The 5'-upstream regions of PRR5-target-like genes from poplar and rice tend to contain G-box-like elements that are potentially recognized by PRRs in vivo as has been shown in Arabidopsis. Expression of PRR5-target-like genes from poplar and rice tends to decrease when PRRs are expressed, possibly suggesting that the transcriptional network of PRRs is evolutionarily conserved in these plants.</AbstractText>
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Evolutionary Insight into the Clock-Associated PRR5 Transcriptional Network of Flowering Plants.

Evolutionary Insight into the Clock-Associated PRR5 Transcriptional Network of Flowering Plants.

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